CHANDRA LAB
  • Tools and Databases
  • PLIC
    PLIC: A database of protein-ligand interaction clusters. Can be accessed from - <a href=http://proline.biochem.iisc.ernet.in/PLIC>http://proline.biochem.iisc.ernet.in/PLIC</a>
  • ABS-Scan
    Alanine scanning mutagenesis of binding site residues. Can be accessed from - <a href=http://proline.biochem.iisc.ernet.in/abscan>http://proline.biochem.iisc.ernet.in/abscan</a>
  • PocketDB
    PocketDB can be accessed from - <a href=http://proline.biochem.iisc.ernet.in/PocketDB>http://proline.biochem.iisc.ernet.in/PocketDB/</a>
  • HLA-Classify
    HLA-Classify: Structure and function based grouping of HLA-Class I alleles. Can be accessed from - <a href=http://proline.biochem.iisc.ernet.in/hlaclassify>http://proline.biochem.iisc.ernet.in/hlaclassify</a>
  • Mtb Structural Annotation
    Structural annotation of Mtb Proteome. Can be accessed from - <a href=http://proline.physics.iisc.ernet.in/Tbstructuralannotation>http://proline.physics.iisc.ernet.in/Tbstructuralannotation</a>
  • PocketAnneal
    Designing binding site on a protein scaffold for specific ligand. Can be accessed from - <a href=http://proline.biochem.iisc.ernet.in/PocketAnnealWeb2>http://proline.biochem.iisc.ernet.in/PocketAnnealWeb2</a>
  • SInCRE
    Comprehensive resource on analysis of Mtb genome. Can be accessed from - <a href=http://proline.biochem.iisc.ernet.in/sincre>http://proline.biochem.iisc.ernet.in/sincre</a>
  • Mtb Pocketome
    Supplementary information for Mtb Pocketome. Can be accessed from - <a href=http://proline.biochem.iisc.ernet.in/mtbpocketome>http://proline.biochem.iisc.ernet.in/mtbpocketome</a>
  • PocketDepth
    PocketDepth: A binding site prediction tool. Can be accessed from - <a href=http://proline.physics.iisc.ernet.in/pocketdepth/ > http://proline.physics.iisc.ernet.in/pocketdepth/</a>
  • PocketMatch
    PocketMatch: A binding site comparison tool. Can be accessed from - <a href=http://proline.physics.iisc.ernet.in/pocketmatch>http://proline.physics.iisc.ernet.in/pocketmatch</a>
  • ResponseNet
    ResponseNet: Mining biologically Relevant Subnetworks through Integration of Protein Interaction Networks and Gene Expression Data. Can be accessed from - <a href='http://proline.physics.iisc.ernet.in/responsenet/'>http://proline.physics.iisc.ernet.in/responsenet</a>
  • FLAPP Scanner
    NRscan: PDB wide binding site scan. Can be accessed from - <a href='http://proline.physics.iisc.ernet.in/flappscanner/'>http://proline.physics.iisc.ernet.in/flappscanner</a>
  • Sitextract
    Sitextract: Extract binding sites from PDB files. Can be accessed from - <a href='http://proline.physics.iisc.ernet.in/sitextract/'>http://proline.physics.iisc.ernet.in/sitextract</a>