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| Dataset construction | |
|---|---|
| Primary set (lectin sequences from PIR/PRF/PDB/DDBJ/EMBL/Genbank/SwissProt) | 3272 |
| Filtered set | |
| Xref redundancy | 1064 |
| Length criteria | 999 |
| Sequence redundancy | 966 |
| Manual inspection of annotation | 947 |
| Final set (Lectindb) | 947 |
| Total number of plants | 241 |
| Domain annotation | |||||
|---|---|---|---|---|---|
| Total number of domains in Lectindb | 3583 |
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| Total/Unique domains identified from: | CDD 842/12 |
COG 1/1 |
KOG 318/17 |
SMART 809/27 |
PFAM 1613/35 |
| Td:Sum of unique domains in all domain databases | 92 (contains 21 lectin domains) |
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| Unique domains from Td | 63 (contains 11 lectin domains) |
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| Number of lectin sequences with multiple domains | 538 |
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| Structural Annotation | |
|---|---|
| Lectins whose structure is available thriugh PDB | 71 |
| Lectins whose structure can be built by homology modeling | 433 |
| Lectins whose structure can be predicted by fold recognition | 399 |
| Unknown lectin structures | 44 |
| Distribution of lectin domains across various folds | |
|---|---|
| Beta prism I | 143 |
| Beta prism II | 249 |
| Beta trefoil | 42 |
| Concanavalin A | 210 |
| Knottins | 30 |
| P-domain of calnexin/calreticulin | 14 |
| 7/6-bladed beta propeller | 26 |
| Distribution of other domains co-occuring with lectins | 256 |