May 23, 2013, Thursday, 142

Publications

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[edit] 2012

  • N. Chandra and J. Padiadpu, Network approaches to drug discovery.Expert Opinion on Drug Discovery, 2012, 0, 1-14. [Early online 10 Nov 2012] PMID: 23140510


  • Vashisht R, Mondal AK, Jain A, Shah A, Vishnoi P, Priyadarshini P, Bhattacharyya K, Rohira H, Bhat AG, Passi A, Mukherjee K, Choudhary KS, Kumar V, Arora A, Munusamy P, Subramanian A, Venkatachalam A, S G, Raj S, Chitra V, Verma K, Zaheer S, J B, Gurusamy M, Razeeth M, Raja I, Thandapani M, Mevada V, Soni R, Rana S, Ramanna GM, Raghavan S, Subramanya SN, Kholia T, Patel R, Bhavnani V, Chiranjeevi L, Sengupta S, Singh PK, Atray N, Gandhi S, Avasthi TS, Nisthar S, Anurag M, Sharma P, Hasija Y, Dash D, Sharma A, Scaria V, Thomas Z; OSDD Consortium, Chandra N, Brahmachari SK, Bhardwaj A. Crowd Sourcing a New Paradigm for Interactome Driven Drug Target Identification in Mycobacterium tuberculosis. PLoS One. 2012;7(7):e39808. Epub 2012 Jul 11. PubMed PMID: 22808064; PubMed Central PMCID: PMC3395720.


  • Padiadpu J, Mukherjee S, Chandra N. Rationalization and prediction of drug resistant mutations in targets for clinical anti-tubercular drugs. J Biomol Struct Dyn. 2012 Jul 18. [Epub ahead of print] PubMed PMID: 22803837.


  • Ananthasubramanian S, Metri R, Khetan A, Gupta A, Handen A, Chandra N, Ganapathiraju M. Mycobacterium tuberculosis and Clostridium difficille interactomes: demonstration of rapid development of computational system for bacterial interactome prediction. Microb Inform Exp. 2012 Mar 21;2(1):4.


  • Praveen Anand, Kalidas Yeturu and Nagasuma Chandra. PocketAnnotate: Towards site-based function annotation. Nucleic Acids Res. 2012 Jul;40(Web Server issue):W400-8.

[edit] 2011

  • Ghosh S, Prasad KV, Vishveshwara S, Chandra N. Rule-based modelling of iron homeostasis in tuberculosis. Mol Biosyst. 2011 Oct 1;7(10):2750-68. PubMed PMID: 21833436.


  • Bhardwaj A, Scaria V, Raghava GP, Lynn AM, Chandra N, Banerjee S, Raghunandanan MV, Pandey V, Taneja B, Yadav J, Dash D, Bhattacharya J, Misra A, Kumar A, Ramachandran S, Thomas Z, Open Source Drug Discovery Consortium, Brahmachari SK. Open source drug discovery- A new paradigm of collaborative research in tuberculosis drug development. Tuberculosis 2011 91(5):479-86. PubMed PMID: 21782516.
  • Yeturu K, Chandra N. PocketAlign a novel algorithm for aligning binding sites in protein structures. J Chem Inf Model. 2011 Jul 25;51(7):1725-36. PubMed PMID: 21662242.


  • Chandra N, Kumar D, Rao K. Systems biology of tuberculosis. Tuberculosis 2011 Sep;91(5):487-96. Epub 2011 Apr 1. PubMed PMID: 21459043.


  • Ashish Arora, Nagasuma R. Chandra, Amit Das, Balasubramanian Gopal, Shekhar C. Mande, Balaji Prakash, Ravishankar Ramachandran, Rajan Sankaranarayanan, K. Sekar, Kaza Suguna, Anil K. Tyagi, Mamannamana Vijayan Structural biology of Mycobacterium tuberculosis proteins: The Indian efforts. 2011 Tuberculosis 91(5):456-68. Epub 2011 Apr 22. PubMed PMID: 21514889.


  • Karthik Raman and Nagasuma Chandra (2011) "Systems Biology of tuberculosis: Insights for drug discovery", In: W. Dubitzky, J Southgate and H. Fuss (editors), In: Understanding the Dynamics of Biological Systems: Lessons Learned from Integrative Systems Biology, pp 83-110, Springer ISBN 9781441979636, DOI: 10.1007/978-1-4419-7964-3_5


  • Ashwini G. Bhat, Rohit Vashisht, Nagasuma Chandra (2011) Modeling metabolic adjustment in Mycobacterium tuberculosis upon treatment with Isoniazid Systems and Synthetic Biology Volume 4, Number 4, 299-309 Link


  • Jyothi Padiadpu, Rohit Vashisht, Nagasuma Chandra (2011) Protein-protein interaction networks suggest different targets have different propensities for triggering drug resistance Systems and Synthetic Biology Volume 4, Number 4, 311-322 Link


  • Nagasuma Chandra, Raghu Bhagavat, Eshita Sharma, Srikanth Reddy, Kumar Somasundaram (2011) Virtual screening, identification and experimental testing of novel inhibitors of PBEF1/Visfatin/NMPRTase for glioma therapy Clinical Bioinformatics 2011, 1:5 Link

[edit] 2010

  • Chaturvedi R, Bansal K, Narayana Y, Kapoor N, Sukumar N, Togarsimalemath SK, Chandra N, Mishra S, Ajitkumar P, Joshi B, Katoch VM, Patil SA, Balaji KN. (2010) The multifunctional PE_PGRS11 protein from Mycobacterium tuberculosis plays a role in regulating resistance to oxidative stress J Biol Chem 285(40):30389-403 PMID 20558725


  • Nagasuma Chandra, Praveen Anand and Kalidas Yeturu (2010) Structural bioinformatics: Deriving biological insights from protein structures Interdisciplinary Sciences: Computational Life Sciences Volume 2, Number 4, 347-366 PMID 21153779


  • Nishanth Ulhas Nair, Navin Goyal, Nagasuma Chandra (2010) Enhanced flux balance analysis to model metabolic networks BCB '10 Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology Link


  • Kalidas Yeturu, Tapani Utriainen, Graham J.L. Kemp and Nagasuma Chandra (2010) "An automated framework for understanding structural variations in the binding grooves of MHC class II molecules" BMC Bioinformatics, 11(Suppl 1):S55 PMID 20122230


  • Karthik Raman, Ashwini G. Bhat and Nagasuma Chandra (2010) "A systems perspective of host-pathogen interactions: Predicting disease outcome in tuberculosis" Molecular BioSystems, 2010, 6(3): 516 - 530 PMID 20174680


  • Prabuddha Gupta, Haryadi Rajeswari, Muthu Arumugam, Saurabh Mishra, Raghu Bhagavat, Praveen Anand, Nagasuma Chandra, Ramanujam Srinivasan, Shantinath Indi and Parthasarathi Ajitkumar, (2010) Mycobacterium tuberculosis FtsZ requires at least one arginine residue at the C-terminal end for polymerisation in vitro Acta Biochimica et Biophysica Sinica 2010, 42(1):58-69 PMID 20043048


  • Karthik Raman and Nagasuma Chandra (2010) "Systems Biology", Resonance. 2010 Feb;15(2):131-154 Link

[edit] 2009

  • Karthik Raman, Kalidas Yeturu, Ashwini Bhat and Nagasuma Chandra (2009) Systems-level modelling of Mycobacterium tuberculosis for anti-tubercular drug target identification, Biobytes (Open access newsletter), 2009, 5:63-67 Link


  • Chandra N (2009) Computational Systems Approach for Drug Target Discovery, Expert Opinion on Drug Discovery 2009 Dec; 4(12): 1221-1236


  • Chandra N and Chandra S (2009) Navigating Across Multi-Scale Biological Systems Using Cognitive Modeling and Systems Approaches Conceptualized in Product Engineering", Microsoft Research e-science Meeting


  • Raman, K, Vashisht R, Chandra NR (2009) Strategies for efficient disruption of metabolism in Mycobacterium tuberculosis from network analysis. Molecular Biosystems, 2009 5(12): 1740-1751 PMID 19593474


  • Raman K, Chandra N (2009) Flux balance analysis of biological systems: applications and challenges. Brief Bioinform. 2009 Jul;10(4):435-49 PMID 19287049


  • Karthikeyan Ramaswamy, Mohamed Sadiq, Sridhar V, Nagasuma Chandra (2009) Support Vector Machine Classifier for Predicting Drug Binding to P-glycoprotein J Proteomics Bioinform 2009, 2: 193-201 Link


  • Prabu JR, Thamotharan S, Khanduja JS, Chandra NR, Muniyappa K, Vijayan M (2009) Crystallographic and modelling studies on Mycobacterium tuberculosis RuvA- Additional role of RuvB-binding domain and inter species variability. Biochim Biophys Acta. Volume 1794, Issue 7, July 2009, Pages 1001-1009 PMID 19374958


  • Bhadra S, Bhattacharyya C, Chandra NR, Mian IS. (2009) A linear programming approach for estimating the structure of a sparse linear genetic network from transcript profiling data. Algorithms Mol Biol. Feb 24;4:5. PMID 19239685


  • Vani J, Chatterjee J, Shaila MS, Nayak R, Chandra NR. (2009) Structural basis for the function of anti-idiotypic antibody in immune memory. Mol Immunol. Mar;46(6):1250-1255. PMID 19157554

[edit] 2008

  • Raman K, Yeturu K and Chandra N (2008) targetTB: A target identification pipeline for Mycobacterium tuberculosis through an interactome, reactome and genome-scale structural analysis BMC Systems Biology 2008, 2:109 PMID 19099550


  • Raman K and Chandra N (2008) Mycobacterium tuberculosis interactome analysis unravels potential pathways to drug resistance BMC Microbiology 2008, 2:109 PMID 19105810



  • Das S, Laxminarayana SV, Chandra N, Ravi V, Desai A. (2008) Heat shock protein 70 on Neuro2a cells is a putative receptor for Japanese encephalitis virus. Virology. 2009 Mar 1;385(1):47-57 [Epub ahead of print 2008] PMID 19068261 [PubMed - as supplied by publisher]


  • Nagaraj VA, Arumugam R, Chandra NR, Prasad D, Rangarajan PN, Padmanaban G. (2008) Localisation of Plasmodium falciparum uroporphyrinogen III decarboxylase of the heme-biosynthetic pathway in the apicoplast and characterisation of its catalytic properties. Int J Parasitol. 2009 Apr;39(5):559-68 [Epub ahead of print 2008] PMID 19041871


  • Prabu JR, Manjunath GP, Chandra NR, Muniyappa K, Vijayan M. (2008) Functionally important movements in RecA molecules and filaments: studies involving mutation and environmental changes. Acta Crystallogr D Biol Crystallogr. 2008 Nov;64(Pt 11):1146-57. Epub 2008 Oct 18. PMID 19020353


  • Damodaran D, Jeyakani J, Chauhan A, Kumar N, Chandra NR, Surolia A. (2008) CancerLectinDB: a database of lectins relevant to cancer. Glycoconj J. Apr;25(3):191-8 PMID 18038206


  • Yeturu Kalidas & Nagasuma Chandra (2008) Structural Bioinformatics: Transforming protein structures into biological insights. Journal of the Indian Institute of Science VOL 88:2 (Apr-Jun 2008). [1]


  • Kalidas, Y. & Chandra, N.R. (2008), PocketDepth: A new depth based algorithm for identification of ligand binding sites in proteins, J. Structural Biology ,161(1):31-42. PMID 17949996

[2]

  • M. G. Chaitra, M. S. Shaila, N. R. Chandra, R. Nayak (2008) HLA-A*0201-restricted Cytotoxic T-cell Epitopes in Three PE/PPE Family Proteins of Mycobacterium tuberculosis Scandinavian Journal of Immunology. 67(4):411-417. PMID 18248530

[edit] 2007

  • Gangadhar V, Jeyakani JJ, Shaila MS, Nayak R, Chandra N. (2007) Perpetuation of immunological memory through common MHC-I binding modes of peptidomimic and antigenic peptides. Biochem Biophys Res Commun. 2007 Dec 14;364(2):308-12. PMID 17950699


  • Ketki Verkhedkar, Karthik Raman, Nagasuma Chandra and Saraswathi Vishveshwara (2007) Metabolome based reaction graphs of M. tuberculosis and M. leprae: A comparative network analysis PLoS ONE 2(9): e881. PMID 17849010


  • Kanade S. R., Suhas V. L., Chandra N. & Gowda L. R. (2007). Functional interaction of diphenols with polyphenol oxidase. FEBS J. 274, 4177-87. PMID 17651437


  • Singh D. D., Chandran D., Jeyakani J. & Chandra N. (2007). Scanning the Genome of Mycobacterium Tuberculosis to Identify Potential Lectins. Protein. Pept. Lett. 2007;14(7):683-91. PMID 17897094


  • Sivapriya K., Hariharaputran S., Suhas V. L., Chandra N. & Chandrasekaran S. (2007). Conformationally locked thiosugars as potent alpha-mannosidase inhibitors: Synthesis, biochemical and docking studies. Bioorg. Med. Chem. 15, 5659-65. PMID 17574420


  • Dash B. P., Mukherjee S., Suhas V. L. & Chandra N. (2007). Interaction Profiling of T-Cell Epitopes with MHC-Class I Molecules. Protein Pept Lett. 14, 557-64. 2007;14(6):557-64 PMID 17627596


  • Karthik Raman, Preethi Rajagopalan and Nagasuma Chandra (2007) Hallmarks of Mycolic Acid Biosynthesis: A Comparative Genomics Study Proteins: Structure, Function and Bioinformatics 69, 358--368 PMID 17600834


  • Vani J., Jeyakani J., Chandra N. R., Nayak R. & Shaila M. S. (2007). Peptidomimics of antigen are present in variable region of heavy and light chains of anti-idiotypic antibody and function as surrogate antigens for perpetuation of immunological memory. Mol. Immunol. 44, 3345-3354 PMID 17408744


  • Sriharsha S. N., Pai K. S. R., Suhas V. L., Shashikanth S. & Chandra N. R. (2007). Synthesis, Docking and anti-tumor activity of -L-1,3-Thiazolidine pyrimidine nucleoside analogues. Curr. Med. Chem., Med Chem. 2007 Sep;3(5):425-32. PMID 17897066


  • Poddar P., Chandra N., Ganapathiraju M., Sekar K., Klein-Seetharaman J., Reddy R. & Balakrishnan N. (2007). Genome sequence analysis using suffix arrays: Application leading to evolutionary insights. J. BioSci. 2007, (Special issue, InCoB `06). PMID 17914229


  • R. Parida, M. S. Shaila, S. Mukherjee, N. R. Chandra, R. Nayak (2007) Computational analysis of proteome of H5N1 avian influenza virus to define T cell epitopes with vaccine potential. Vaccine. 25, 7530-7539 PMID 17900763


  • Khodade P., Prabhu R, Chandra N., Raha S. & Govindarajan R. (2007) Parallel Implementation of Autodock. J. Appl. Crystallogr. 40, 598-599


  • Khodade P., Malhotra S., Kumar N., Iyengar M. S., Balakrishnan N. & Chandra N. (2007) Cytoview: Development of a Cell modeling framework J. Biosci., 2007 Aug;32(5):965-77. PMID 17914238


  • Bhattacharya S., Bhattacharyya C. & Chandra N. R. (2007). Comparison of protein structures by growing neighborhood alignments. BMC Bioinformatics 8, 77. PMID 17338826


  • Konkimalla V. B., Suhas V. L., Chandra N. R., Gebhart E. & Efferth T. (2007). Diagnosis and therapy of oral squamous cell carcinoma. Expert. Rev. Anticancer Ther. 7, 317-29. PMID 17338652


  • Krishna R., Prabu J. R., Manjunath G. P., Datta S., Chandra N. R., Muniyappa K. & Vijayan M. (2007). Snapshots of RecA protein involving movement of the C-domain and different conformations of the DNA-binding loops: crystallographic and comparative analysis of 11 structures of Mycobacterium smegmatis RecA. J. Mol. Biol. 367, 1130-44. PMID 17306300


  • Vidyasagar, … Chandra N. R., … et al (NMITLI consortium for BioSuite) (2007). BioSuite: A comprehensive bioinformatics software package (a unique-industry- academia collaboration). Curr. Sci. 92, 29-38. Link

[edit] 2006

  • Bhattacharya S., Bhattacharyya C. & Chandra N. R. (2006). Projections for fast protein structure retrieval. BMC Bioinformatics 7 Suppl 5:S5. PMID 17254310


  • Ramesha K. P., Gowda S., Chandra N. R. & Rao M. R. S. (2006). Single nucleotide polymorphisms in -lactalbumin gene in cattle and their effect on the mature protein. Indian J. Anim Sci. 76, 816-820


  • Bhavani S., Nagargadde A., Thawani A., Sridhar V. & Chandra N. (2006). Substructure-Based Support Vector Machine Classifiers for Prediction of Adverse Effects in Diverse Classes of Drugs J. Chem. Inf. Model. 46, 2478 -2486. PMID 17125188


  • Ramesh S, Bharath MM, Chandra NR, Rao MR. A K52Q substitution in the globular domain of histone H1t modulates its nucleosome binding properties. FEBS Lett 580(25):5999-6006. PMID 17052712


  • Vinod PK, Konkimalla B, Chandra N. In-silico pharmacodynamics: correlation of adverse effects of H2-antihistamines with histamine N-methyl transferase binding potential. Appl Bioinformatics 2006;5(3):141-50. PMID 16922595


  • Prabu JR, Thamotharan S, Khanduja JS, Alipio EZ, Kim CY, Waldo GS, Terwilliger TC, Segelke B, Lekin T, Toppani D, Hung LW, Yu M, Bursey E, Muniyappa K, Chandra NR, Vijayan M. Structure of Mycobacterium tuberculosis RuvA, a protein involved in recombination. Acta Crystallograph Sect F Struct Biol Cryst Commun 2006 Aug 1;62(Pt 8):731-4. PMID 16880543


  • Chandra N. Common scaffolds, diverse recognition profiles. Structure 2006 Jul;14(7):1093-4. PMID 16843888


  • Chandra NR, Kumar N, Jeyakani J, Singh DD, Gowda SB, Prathima MN. Lectindb: a plant lectin database. Glycobiology 2006 Oct;16(10):938-46. PMID 16782824


  • Krishna R, Manjunath GP, Kumar P, Surolia A, Chandra NR, Muniyappa K, Vijayan M. Crystallographic identification of an ordered C-terminal domain and a second nucleotide-binding site in RecA: new insights into allostery. Nucleic Acids Res 2006 Apr 28;34(8):2186-95. PMID 16648362


  • Karthik Raman, Preethi Rajagopalan and Nagasuma Chandra (2006) "Principles and Practices of Pathway Modelling" Current Bioinformatics 1(2):147—160 Abstract


  • Vani J, Shaila MS, Chandra NR, Nayak R. A combined immuno-informatics and structure-based modeling approach for prediction of T cell epitopes of secretory proteins of Mycobacterium tuberculosis. Microbes Infect, 2006 Mar; 8(3):738-46. PMID 16476561
    • TABLES "Combined in silico approach for defining T-cell epitopes from secretory proteins of M. tuberculosis"
    • Table I - M. tuberculosis peptide sequences showing homology with human proteins
    • Table II - Peptides from selected secretory proteins of M. tuberculosis foreign to human


  • Rajan Prabu , Vetriselvi Rangannan and Nagasuma Chandra. Carbohydrate based drug design: Recognition fingerprints and their use in lead identification. Indian Journal of Chemistry: Special issue on Structure based drug design, Jan 2006

[edit] 2005

  • K. Raman, P. Rajagopalan, and N. Chandra. Flux balance analysis of mycolic acid pathway: targets for anti-tubercular drugs. PLoS Comput Biol, 1(5):e46, Oct 2005 PMID 16261191


  • MG. Chaitra, S. Hariharaputran, NR. Chandra, MS. Shaila, and R. Nayak. Defining putative T cell epitopes from PE and PPE families of proteins of Mycobacterium tuberculosis with vaccine potential. Vaccine, 23(10):1265-1272, Jan 2005 PMID 15652669.

[edit] 2004

  • S. Raval, SB. Gowda, DD. Singh, and NR. Chandra. A database analysis of jacalin-like lectins: sequence-structure-function relationships. Glycobiology, 14(12):1247-1263, Dec 2004. PMID 15329359


  • P. Kumar, AG. Rao, S. Hariharaputran, N. Chandra, and LR. Gowda. Molecular mechanism of dimerization of Bowman-Birk inhibitors. Pivotal role of ASP76 in the dimerzation. J Biol Chem, 279(29):30425-30432, Jul 2004. PMID 15123729


  • T. Prasad, T. Subramanian, S. Hariharaputran, HS. Chaitra, and N. Chandra. Extracting hydrogen-bond signature patterns from protein structure data. Appl Bioinformatics, 3(2-3):125-135, 2004. PMID 15693738


  • S. Dhanasekaran, NR. Chandra, BK. Chandrasekhar Sagar, PN. Rangarajan, and G. Padmanaban. Delta-aminolevulinic acid dehydratase from Plasmodium falciparum: indigenous versus imported. J Biol Chem, 279(8):6934-6942, Feb 2004. PMID 14638682


  • Muniyappa K., Ganesh N., Guhan N., Singh P., Manjunath G. P., Datta S., Chandra N. and Vijayan M. Homologous recombination in mycobacteria. Curr. Sci. 86:141-148, 2004

[edit] 2003

  • G. Ramachandraiah, NR. Chandra, A. Surolia, and M. Vijayan. Computational analysis of multivalency in lectins: structures of garlic lectin-oligosaccharide complexes and their aggregates. Glycobiology, 13(11):765-775, Nov 2003. PMID 12851290
  • VB. Konkimalla and N. Chandra. Determinants of histamine recognition: implications for the design of antihistamines. Biochem Biophys Res Commun, 309(2):425-431, Sep 2003. PMID 12951067
  • S. Datta, R. Krishna, N. Ganesh, NR. Chandra, K. Muniyappa, and M. Vijayan. Crystal structures of Mycobacterium smegmatis RecA and its nucleotide complexes. J Bacteriol, 185(14):4280-4284, Jul 2003. PMID 12837805
  • MM. Bharath, NR. Chandra, and MR. Rao. Molecular modeling of the chromatosome particle. Nucleic Acids Res, 31(14):4264-4274, Jul 2003. PMID 12853645
  • J. Shobini, AK. Mishra, and N. Chandra. Conformation of gramicidin-A in CTAB micellar media. J Photochem Photobiol B, 70(2):117-124, May-Jun 2003. PMID 12849702
  • S. Datta, N. Ganesh, NR. Chandra, K. Muniyappa, and M. Vijayan. Structural studies on MtRecA-nucleotide complexes: insights into DNA and nucleotide binding and the structural signature of NTP recognition. Proteins, 50(3):474-485, Feb 2003. PMID 12557189
  • T. Prasad, MN. Prathima, and N. Chandra. Detection of hydrogen-bond signature patterns in protein families. Bioinformatics, 19(1):167-168, Jan 2003. PMID 12499314

[edit] 2002

  • MM. Bharath, NR. Chandra, and MR. Rao. Prediction of an HMG-box fold in the C-terminal domain of histone H1: insights into its role in DNA condensation. Proteins, 49(1):71-81, Oct 2002. PMID 12211017
  • MM. Bharath, S. Ramesh, NR. Chandra, and MR. Rao. Identification of a 34 amino acid stretch within the C-terminus of histone H1 as the DNA-condensing domain by site-directed mutagenesis. Biochemistry, 41(24):7617-7627, Jun 2002. PMID 12056893
  • G. Ramachandraiah, NR. Chandra, A. Surolia, and M. Vijayan. Re-refinement using reprocessed data to improve the quality of the structure: a case study involving garlic lectin. Acta Crystallogr D Biol Crystallogr, 58(Pt 3):414-420, Mar 2002. PMID 11856826

[edit] 2001

  • NR. Chandra, MM. Prabu, K. Suguna, and M. Vijayan. Structural similarity and functional diversity in proteins containing the legume lectin fold. Protein Eng, 14(11):857-866, Nov 2001. PMID 11742104
  • J. Shobini, AK. Mishra, K. Sandhya, and N. Chandra. Interaction of coumarin derivatives with human serum albumin: investigation by fluorescence spectroscopic technique and modeling studies. Spectrochim Acta A Mol Biomol Spectrosc, 57A(5):1133-1147, Apr 2001. PMID 11374572

[edit] 2000

  • S. Datta, MM. Prabu, MB. Vaze, N. Ganesh, NR. Chandra, K. Muniyappa, and M. Vijayan. Crystal structures of Mycobacterium tuberculosis RecA and its complex with ADP-AlF(4): implications for decreased ATPase activity and molecular aggregation. Nucleic Acids Res, 28(24):4964-4973, Dec 2000. PMID 11121488
  • G. Ramachandraiah and NR. Chandra. Sequence and structural determinants of mannose recognition. Proteins, 39(4):358-364, Jun 2000. PMID 10813817

[edit] 1999—1995

  • M. Vijayan and N. Chandra. Lectins. Curr Opin Struct Biol, 9(6):707-714, Dec 1999. PMID 10607664


  • NR. Chandra, G. Ramachandraiah, K. Bachhawat, TK. Dam, A. Surolia, and M. Vijayan. Crystal structure of a dimeric mannose-specific agglutinin from garlic: quaternary association and carbohydrate specificity. J Mol Biol, 285(3):1157-1168, Jan 1999. PMID 9887270


  • R. Ravishankar, NR. Chandra, and M. Vijayan. X-ray studies on crystalline complexes involving amino acids and peptides XXXIV. Novel mode of aggregation, interaction patterns and chiral effects in the maleic acid complexes of DL- and L- arginine. J Biomol Struct Dyn, 15(6):1093-1100, Jun 1998. PMID 9669554


  • NR. Chandra, H. Muirhead, JJ. Holbrook, BE. Bernstein, WG. Hol, and RB. Sessions. A general method of domain closure is applied to phosphoglycerate kinase and the result compared with the crystal structure of a closed conformation of the enzyme. Proteins, 30(4):372-380, Mar 1998. PMID 9533621


  • NR. Chandra, TK. Dam, A. Surolia, and M. Vijayan. Crystallization and preliminary crystallographic studies on the mannose-specific lectin from garlic. Acta Crystallogr D Biol Crystallogr, 53(Pt 6):787-788, Nov 1997. PMID 15299871


  • RA. Kumar, MB. Vaze, NR. Chandra, M. Vijayan, and K. Muniyappa. Functional characterization of the precursor and spliced forms of RecA protein of Mycobacterium tuberculosis. Biochemistry, 35(6):1793-1802, Feb 1996. PMID 8639660


  • RV. Kishan, NR. Chandra, C. Sudarsanakumar, K. Suguna, and M. Vijayan. Water-dependent domain motion and flexibility in ribonuclease A and the invariant features in its hydration shell. An X-ray study of two low-humidity crystal forms of the enzyme. Acta Crystallogr D Biol Crystallogr, 51(Pt 5):703-710, Sep 1995. PMID 15299799

[edit] Pre-1995

  • H. C. Joao, R.J.P. Williams, J.A. Littlechild, R. Nagasuma, and H.C. Watson. An investigation of large inhibitors binding to phosphoglycerate kinase and their effect on anion activation. European Journal of Biochemistry, 205(3):1077-1088, 1992. PMID 1349525


  • Vani Brahmachari, Nagasuma.R, and Samir K. Brahmachari. Preparation of megabase-size DNA from adult insects and mammalian spleen for Pulsed-Field Gel Electrophoresis. Journal of Genetics, 68(3):185-188, 1989.
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